Index A | C | D | E | F | G | I | M | N | O | P | R | S | T | W A AnnotatedGrowthCurve (class in croissance.estimation) C close() (croissance.figures.writer.PDFWriter method) (croissance.formats.output.TSVWriter method) constrain_n0 (croissance.estimation.GrowthEstimationParameters attribute) croissance module croissance.estimation module croissance.estimation.outliers module croissance.estimation.ranking module croissance.estimation.regression module croissance.estimation.smoothing module croissance.estimation.smoothing.segments module croissance.estimation.util module croissance.figures module croissance.figures.plot module croissance.figures.writer module croissance.formats module croissance.formats.input module croissance.formats.output module croissance.main module curve_minimum_duration_hours (croissance.estimation.GrowthEstimationParameters attribute) D duration (croissance.estimation.GrowthPhase property) (croissance.estimation.RawGrowthPhase property) E entry_point() (in module croissance.main) estimate_growth() (in module croissance.estimation) EstimatorWrapper (class in croissance.main) exponential() (in module croissance.estimation.regression) F fit_exponential() (in module croissance.estimation.regression) G growth_phases (croissance.estimation.AnnotatedGrowthCurve attribute) GrowthEstimationParameters (class in croissance.estimation) GrowthPhase (class in croissance.estimation) I init_worker() (in module croissance.main) M main() (in module croissance.main) module croissance croissance.estimation croissance.estimation.outliers croissance.estimation.ranking croissance.estimation.regression croissance.estimation.smoothing croissance.estimation.smoothing.segments croissance.estimation.util croissance.figures croissance.figures.plot croissance.figures.writer croissance.formats croissance.formats.input croissance.formats.output croissance.main N n0 (croissance.estimation.GrowthEstimationParameters attribute) normalize_time_unit() (in module croissance.estimation.util) O outliers (croissance.estimation.AnnotatedGrowthCurve attribute) P parse_args() (in module croissance.main) PDFWriter (class in croissance.figures.writer) phase_minimum_duration_hours (croissance.estimation.GrowthEstimationParameters attribute) phase_minimum_signal_noise_ratio (croissance.estimation.GrowthEstimationParameters attribute) phase_minimum_slope (croissance.estimation.GrowthEstimationParameters attribute) phase_rank_exclude_below (croissance.estimation.GrowthEstimationParameters attribute) phase_rank_weights (croissance.estimation.GrowthEstimationParameters attribute) pick_best() (croissance.estimation.GrowthPhase static method) plot_processed_curve() (in module croissance) (in module croissance.figures.plot) points_per_hour() (in module croissance.estimation.util) process_curve() (in module croissance) R rank_phases() (in module croissance.estimation.ranking) RawGrowthPhase (class in croissance.estimation) read() (croissance.formats.input.TSVReader method) remove_outliers() (in module croissance.estimation.outliers) S savitzky_golay() (in module croissance.estimation.util) score() (in module croissance.estimation.ranking) segment_by_std_dev() (in module croissance.estimation.smoothing.segments) segment_log_n0 (croissance.estimation.GrowthEstimationParameters attribute) segment_points() (in module croissance.estimation.smoothing.segments) segment_spline_smoothing() (in module croissance.estimation.smoothing.segments) series (croissance.estimation.AnnotatedGrowthCurve attribute) setup_logging() (in module croissance.main) signal_noise_ratio() (in module croissance.estimation.regression) T TSVReader (class in croissance.formats.input) TSVWriter (class in croissance.formats.output) W window_median() (in module croissance.estimation.smoothing.segments) with_overhangs() (in module croissance.estimation.util) write() (croissance.figures.writer.PDFWriter method) (croissance.formats.output.TSVWriter method)